Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Mir1901-201ENSMUST00000122616 78 ntBASIC12.1□□□□□ -0.47
Ebf3O08791 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Ebf3O08791 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.1□□□□□ -0.47
Ebf3O08791 Gm37028-201ENSMUST00000194276 107 ntBASIC12.1□□□□□ -0.47
Ebf3O08791 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.1□□□□□ -0.47
Ebf3O08791 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ebf3O08791 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.1□□□□□ -0.47
Ebf3O08791 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ebf3O08791 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ebf3O08791 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.09□□□□□ -0.47
Ebf3O08791 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ebf3O08791 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.09□□□□□ -0.47
Ebf3O08791 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.09□□□□□ -0.47
Ebf3O08791 Gm21092-201ENSMUST00000178995 955 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ebf3O08791 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 Gm42657-201ENSMUST00000201746 211 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ebf3O08791 Gm2875-201ENSMUST00000211333 360 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.09□□□□□ -0.47
Ebf3O08791 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ebf3O08791 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ebf3O08791 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ebf3O08791 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.09□□□□□ -0.47
Ebf3O08791 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf3O08791 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Ebf3O08791 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.47
Ebf3O08791 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ebf3O08791 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.08□□□□□ -0.48
Ebf3O08791 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.08□□□□□ -0.48
Ebf3O08791 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Gm18367-201ENSMUST00000176139 600 ntBASIC12.08□□□□□ -0.48
Ebf3O08791 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms