Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Raet1aO08602 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Raet1aO08602 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.3□□□□□ -0.76
Raet1aO08602 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Raet1aO08602 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Raet1aO08602 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Raet1aO08602 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Raet1aO08602 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Raet1aO08602 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Raet1aO08602 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Raet1aO08602 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.29□□□□□ -0.76
Raet1aO08602 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Raet1aO08602 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.29□□□□□ -0.76
Raet1aO08602 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Raet1aO08602 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Raet1aO08602 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Raet1aO08602 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.29□□□□□ -0.76
Raet1aO08602 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.29□□□□□ -0.76
Raet1aO08602 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm11500-201ENSMUST00000118237 601 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Gm11783-201ENSMUST00000119549 885 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm26047-201ENSMUST00000157308 113 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Gm2383-201ENSMUST00000181461 807 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Gm26047-202ENSMUST00000198840 115 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm45113-201ENSMUST00000207518 165 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm45575-201ENSMUST00000210283 548 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Raet1aO08602 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.29□□□□□ -0.76
Raet1aO08602 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Raet1aO08602 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.28□□□□□ -0.76
Raet1aO08602 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Raet1aO08602 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm14724-201ENSMUST00000118400 537 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm14277-201ENSMUST00000121195 360 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.28□□□□□ -0.76
Raet1aO08602 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Raet1aO08602 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 Gm16505-201ENSMUST00000179981 232 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 Gm8100-201ENSMUST00000182906 988 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm5714-201ENSMUST00000197343 566 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 Gm2965-201ENSMUST00000198365 343 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm10254-201ENSMUST00000052888 867 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Raet1aO08602 Gm10288-201ENSMUST00000084614 537 ntBASIC10.28□□□□□ -0.76
Raet1aO08602 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Raet1aO08602 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms