Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 AC126799.1-201ENSMUST00000221976 246 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm5739-201ENSMUST00000208601 1703 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm7964-201ENSMUST00000051522 1378 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm11380-201ENSMUST00000118067 560 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm5267-201ENSMUST00000191574 1045 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Gm44605-201ENSMUST00000206892 949 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 n-R5s71-201ENSMUST00000093668 119 ntBASIC17.28■□□□□ 0.36
Pcf11G3X9Z4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Gm42480-201ENSMUST00000198434 2595 ntBASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcf11G3X9Z4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Gm17214-201ENSMUST00000164501 541 ntBASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcf11G3X9Z4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm12986-201ENSMUST00000119037 967 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm14234-201ENSMUST00000119539 845 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm23647-201ENSMUST00000175042 109 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Rn5s-201ENSMUST00000177555 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s108-201ENSMUST00000177575 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s121-201ENSMUST00000177589 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s146-201ENSMUST00000177889 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm22109-201ENSMUST00000177995 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm22291-201ENSMUST00000178027 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s141-201ENSMUST00000178066 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm23284-201ENSMUST00000178069 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s100-201ENSMUST00000178106 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s111-201ENSMUST00000178203 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s105-201ENSMUST00000178499 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s149-201ENSMUST00000178520 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s103-201ENSMUST00000178755 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s123-201ENSMUST00000178804 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s142-201ENSMUST00000178820 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s144-201ENSMUST00000178859 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s139-201ENSMUST00000178975 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s134-201ENSMUST00000178983 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s136-201ENSMUST00000179080 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm25018-201ENSMUST00000179081 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s104-201ENSMUST00000179107 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s113-201ENSMUST00000179143 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s133-201ENSMUST00000179275 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 n-R5s117-201ENSMUST00000179431 119 ntBASIC17.26■□□□□ 0.35
Pcf11G3X9Z4 Gm25212-201ENSMUST00000179432 119 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms