Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.02□□□□□ -0.17
NpcdF8VQB8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NpcdF8VQB8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.01□□□□□ -0.17
NpcdF8VQB8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Gm3329-201ENSMUST00000159873 556 ntBASIC14.01□□□□□ -0.17
NpcdF8VQB8 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Gm45481-201ENSMUST00000209717 877 ntBASIC14.01□□□□□ -0.17
NpcdF8VQB8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Gm26670-202ENSMUST00000226862 340 ntBASIC14.01□□□□□ -0.17
NpcdF8VQB8 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.01□□□□□ -0.17
NpcdF8VQB8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NpcdF8VQB8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NpcdF8VQB8 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NpcdF8VQB8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
NpcdF8VQB8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NpcdF8VQB8 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NpcdF8VQB8 Gm12179-201ENSMUST00000118344 1272 ntBASIC14□□□□□ -0.17
NpcdF8VQB8 Gm13700-201ENSMUST00000118624 1128 ntBASIC14□□□□□ -0.17
NpcdF8VQB8 Gm14395-201ENSMUST00000120494 563 ntBASIC14□□□□□ -0.17
NpcdF8VQB8 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NpcdF8VQB8 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NpcdF8VQB8 Gm24954-201ENSMUST00000178831 110 ntBASIC14□□□□□ -0.17
NpcdF8VQB8 Gm7741-201ENSMUST00000181445 989 ntBASIC14□□□□□ -0.17
NpcdF8VQB8 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14□□□□□ -0.17
NpcdF8VQB8 Gm35960-201ENSMUST00000202712 767 ntBASIC14□□□□□ -0.17
NpcdF8VQB8 Gm44882-201ENSMUST00000205702 802 ntBASIC14□□□□□ -0.17
NpcdF8VQB8 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14□□□□□ -0.17
NpcdF8VQB8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14□□□□□ -0.17
NpcdF8VQB8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NpcdF8VQB8 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NpcdF8VQB8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms