Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm21577-201ENSMUST00000190823 697 ntBASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm20802-201ENSMUST00000190832 698 ntBASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm43564-201ENSMUST00000196185 211 ntBASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm4778-201ENSMUST00000098878 1098 ntBASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm38246-201ENSMUST00000194318 1511 ntBASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Ccdc188F6WEU2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm12947-201ENSMUST00000116114 420 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm12745-201ENSMUST00000121767 214 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm3828-201ENSMUST00000121817 257 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm14699-201ENSMUST00000122340 228 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm20495-201ENSMUST00000173902 235 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm26379-201ENSMUST00000178125 138 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm20091-201ENSMUST00000179683 189 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm37723-201ENSMUST00000194480 565 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm5738-201ENSMUST00000206016 779 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Gm8730-201ENSMUST00000076373 954 ntBASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc188F6WEU2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Gm6939-201ENSMUST00000122029 864 ntBASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Zfp419-201ENSMUST00000173446 916 ntBASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc188F6WEU2 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms