Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.83□□□□□ -0.36
Scn3aA2ASI5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Gm5805-201ENSMUST00000072779 456 ntBASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn3aA2ASI5 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Gm13351-201ENSMUST00000118087 414 ntBASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Gm44814-201ENSMUST00000207018 434 ntBASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Id2-203ENSMUST00000222667 958 ntBASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Gm12663-201ENSMUST00000118481 958 ntBASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.82□□□□□ -0.36
Scn3aA2ASI5 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scn3aA2ASI5 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Gm7525-201ENSMUST00000219425 454 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms