Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm14892-201ENSMUST00000117636 267 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm14665-201ENSMUST00000122294 557 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm8194-201ENSMUST00000159783 859 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Mir7051-201ENSMUST00000184167 73 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm7600-201ENSMUST00000209657 785 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm26013-201ENSMUST00000104404 119 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm38210-201ENSMUST00000191944 809 ntBASIC12.1□□□□□ -0.47
Scn1aA2APX8 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn1aA2APX8 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Gm1848-201ENSMUST00000120711 789 ntBASIC12.09□□□□□ -0.47
Scn1aA2APX8 Gm15329-201ENSMUST00000121408 155 ntBASIC12.09□□□□□ -0.47
Scn1aA2APX8 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Gm43966-201ENSMUST00000203301 612 ntBASIC12.09□□□□□ -0.47
Scn1aA2APX8 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.09□□□□□ -0.47
Scn1aA2APX8 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn1aA2APX8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Scn1aA2APX8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Scn1aA2APX8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Gm12030-201ENSMUST00000121917 223 ntBASIC12.08□□□□□ -0.48
Scn1aA2APX8 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Gm45594-201ENSMUST00000211717 241 ntBASIC12.08□□□□□ -0.48
Scn1aA2APX8 Gm9139-201ENSMUST00000218817 700 ntBASIC12.08□□□□□ -0.48
Scn1aA2APX8 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.08□□□□□ -0.48
Scn1aA2APX8 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1aA2APX8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms