Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rrp8Q9DB85 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rrp8Q9DB85 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rrp8Q9DB85 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rrp8Q9DB85 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rrp8Q9DB85 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rrp8Q9DB85 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Rrp8Q9DB85 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rrp8Q9DB85 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm22379-201ENSMUST00000157480 131 ntBASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm5996-201ENSMUST00000211110 718 ntBASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Rrp8Q9DB85 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rrp8Q9DB85 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm13422-201ENSMUST00000118834 504 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm18463-201ENSMUST00000207258 474 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm5468-202ENSMUST00000227851 682 ntBASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms