Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm23699-201ENSMUST00000158835 135 ntBASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm6450-201ENSMUST00000200896 574 ntBASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm9555-201ENSMUST00000200908 583 ntBASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Chmp2aQ9DB34 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Gm23085-201ENSMUST00000157849 293 ntBASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Gm8815-201ENSMUST00000173809 620 ntBASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Ntng1-201ENSMUST00000051253 327 ntBASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2aQ9DB34 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm11960-201ENSMUST00000122068 925 ntBASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm45113-201ENSMUST00000207518 165 ntBASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm7940-201ENSMUST00000218195 769 ntBASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Spcs1-203ENSMUST00000226374 592 ntBASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2aQ9DB34 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms