Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 AY036118-201ENSMUST00000200021 923 ntBASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Gm45224-201ENSMUST00000208203 414 ntBASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.62□□□□□ -0.39
Gtf3c6Q9D8P7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Gm13996-201ENSMUST00000118456 430 ntBASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Tmem184b-205ENSMUST00000228002 3315 ntBASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gtf3c6Q9D8P7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Gm26361-201ENSMUST00000158868 186 ntBASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Gm17812-201ENSMUST00000204935 318 ntBASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Gm4157-201ENSMUST00000211647 679 ntBASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Gm17827-201ENSMUST00000211825 742 ntBASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 AC153936.1-201ENSMUST00000219874 395 ntBASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gtf3c6Q9D8P7 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms