Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Gm19091-201ENSMUST00000208120 978 ntBASIC13.86□□□□□ -0.19
Stag1Q9D3E6 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.86□□□□□ -0.19
Stag1Q9D3E6 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Stag1Q9D3E6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Gm17825-201ENSMUST00000206836 794 ntBASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Stag1Q9D3E6 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Gm25063-201ENSMUST00000104666 94 ntBASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Gm26134-201ENSMUST00000178484 110 ntBASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Gm29410-201ENSMUST00000188383 694 ntBASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Gm5996-201ENSMUST00000211110 718 ntBASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms