Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Ddx56Q9D0R4 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx56Q9D0R4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.24□□□□□ -0.45
Ddx56Q9D0R4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gm12501-201ENSMUST00000119163 529 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gm14277-201ENSMUST00000121195 360 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gm6867-201ENSMUST00000219165 425 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gm10288-201ENSMUST00000084614 537 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gm21811-201ENSMUST00000096485 930 ntBASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx56Q9D0R4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx56Q9D0R4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ddx56Q9D0R4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx56Q9D0R4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx56Q9D0R4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx56Q9D0R4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx56Q9D0R4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.21□□□□□ -0.45
Ddx56Q9D0R4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx56Q9D0R4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms