Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snf8Q9CZ28 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm3096-201ENSMUST00000185770 364 ntBASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Olfr284-202ENSMUST00000206647 966 ntBASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm30285-201ENSMUST00000214614 422 ntBASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm5455-201ENSMUST00000058710 715 ntBASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snf8Q9CZ28 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm15370-201ENSMUST00000117158 253 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm6963-201ENSMUST00000147879 379 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm5070-201ENSMUST00000177599 862 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm27501-201ENSMUST00000183599 107 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm6439-201ENSMUST00000199849 862 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm18935-201ENSMUST00000212692 664 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm7399-201ENSMUST00000032395 858 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snf8Q9CZ28 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 333.9 ms