Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Gm15236-201ENSMUST00000117309 379 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 Gm12380-201ENSMUST00000119012 544 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 AC124408.1-201ENSMUST00000228938 707 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Mir433-201ENSMUST00000093564 124 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.66□□□□□ -0.54
Trim33Q99PP7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim33Q99PP7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Gm9136-201ENSMUST00000193368 454 ntBASIC11.65□□□□□ -0.54
Trim33Q99PP7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.65□□□□□ -0.54
Trim33Q99PP7 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.65□□□□□ -0.54
Trim33Q99PP7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.65□□□□□ -0.54
Trim33Q99PP7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim33Q99PP7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim33Q99PP7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.65□□□□□ -0.55
Trim33Q99PP7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim33Q99PP7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim33Q99PP7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim33Q99PP7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.55
Trim33Q99PP7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim33Q99PP7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gm11439-201ENSMUST00000118598 409 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gm15171-201ENSMUST00000122191 334 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim33Q99PP7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.64□□□□□ -0.55
Trim33Q99PP7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms