Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim8Q99PJ2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Gm18935-201ENSMUST00000212692 664 ntBASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Gm10608-202ENSMUST00000213924 676 ntBASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim8Q99PJ2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Gm14723-201ENSMUST00000118686 215 ntBASIC11.4□□□□□ -0.58
Trim8Q99PJ2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Mir8109-201ENSMUST00000184375 117 ntBASIC11.4□□□□□ -0.58
Trim8Q99PJ2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Gm38266-201ENSMUST00000194931 421 ntBASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Morn2-202ENSMUST00000227729 656 ntBASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim8Q99PJ2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim8Q99PJ2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.4□□□□□ -0.59
Trim8Q99PJ2 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.59
Trim8Q99PJ2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim8Q99PJ2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trim8Q99PJ2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms