Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.94□□□□□ -0.66
Nkd1Q99MH6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Gm11511-201ENSMUST00000118146 540 ntBASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Gm14109-201ENSMUST00000118814 309 ntBASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.94□□□□□ -0.66
Nkd1Q99MH6 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd1Q99MH6 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm9192-201ENSMUST00000183221 985 ntBASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm6334-201ENSMUST00000207083 228 ntBASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm5455-201ENSMUST00000058710 715 ntBASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd1Q99MH6 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms