Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdk5rap3Q99LM2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm28937-201ENSMUST00000185413 695 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm29400-201ENSMUST00000187208 695 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm28662-201ENSMUST00000188446 695 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm28251-201ENSMUST00000188835 695 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm37318-201ENSMUST00000194325 695 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm38017-201ENSMUST00000194768 695 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm37287-201ENSMUST00000195449 695 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm37793-201ENSMUST00000195548 695 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm6450-201ENSMUST00000200896 574 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm44651-201ENSMUST00000207343 372 ntBASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk5rap3Q99LM2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk5rap3Q99LM2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk5rap3Q99LM2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk5rap3Q99LM2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk5rap3Q99LM2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk5rap3Q99LM2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk5rap3Q99LM2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.02□□□□□ -0.48
Cdk5rap3Q99LM2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk5rap3Q99LM2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk5rap3Q99LM2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Cts7-204ENSMUST00000225321 1257 ntBASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk5rap3Q99LM2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk5rap3Q99LM2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms