Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.25□□□□□ -0.61
Cstf3Q99LI7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm26361-201ENSMUST00000158868 186 ntBASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm27627-201ENSMUST00000183644 150 ntBASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm43184-201ENSMUST00000197247 542 ntBASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 AY036118-201ENSMUST00000200021 923 ntBASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm6450-201ENSMUST00000200896 574 ntBASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Rps4l-202ENSMUST00000204242 789 ntBASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cstf3Q99LI7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm25890-201ENSMUST00000177643 165 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm22614-201ENSMUST00000178300 165 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm28937-201ENSMUST00000185413 695 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm29400-201ENSMUST00000187208 695 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm28662-201ENSMUST00000188446 695 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm28251-201ENSMUST00000188835 695 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm37318-201ENSMUST00000194325 695 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm38117-201ENSMUST00000194653 939 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm38017-201ENSMUST00000194768 695 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm37287-201ENSMUST00000195449 695 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm37793-201ENSMUST00000195548 695 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms