Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp3Q91W36 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp3Q91W36 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp3Q91W36 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp3Q91W36 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp3Q91W36 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp3Q91W36 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp3Q91W36 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp3Q91W36 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Usp3Q91W36 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm11960-201ENSMUST00000122068 925 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm28937-201ENSMUST00000185413 695 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm29400-201ENSMUST00000187208 695 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm28662-201ENSMUST00000188446 695 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm28251-201ENSMUST00000188835 695 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm37318-201ENSMUST00000194325 695 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm38017-201ENSMUST00000194768 695 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm37287-201ENSMUST00000195449 695 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm37793-201ENSMUST00000195548 695 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm29755-201ENSMUST00000196976 948 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm44100-201ENSMUST00000204329 436 ntBASIC12.16□□□□□ -0.46
Usp3Q91W36 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.16□□□□□ -0.46
Usp3Q91W36 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Usp3Q91W36 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp3Q91W36 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp3Q91W36 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Usp3Q91W36 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp3Q91W36 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Usp3Q91W36 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.16□□□□□ -0.46
Usp3Q91W36 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp3Q91W36 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.15□□□□□ -0.46
Usp3Q91W36 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Usp3Q91W36 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm45832-201ENSMUST00000212762 1443 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Usp3Q91W36 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm13916-201ENSMUST00000117368 628 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm12579-201ENSMUST00000118040 783 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.15□□□□□ -0.46
Usp3Q91W36 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Usp3Q91W36 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm37213-201ENSMUST00000193077 586 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm37986-201ENSMUST00000193285 383 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm37355-201ENSMUST00000193345 606 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Trbv27-201ENSMUST00000193711 277 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm19253-201ENSMUST00000204279 307 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.15□□□□□ -0.46
Usp3Q91W36 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Usp3Q91W36 Gm7940-201ENSMUST00000218195 769 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Cog3-203ENSMUST00000227473 4197 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.15□□□□□ -0.46
Usp3Q91W36 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp3Q91W36 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Usp3Q91W36 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms