Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm12380-201ENSMUST00000119012 544 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm26461-201ENSMUST00000175064 290 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Mir6927-201ENSMUST00000184494 71 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm18827-201ENSMUST00000188341 790 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.73□□□□□ -0.53
Clip4Q8CI96 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clip4Q8CI96 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gm15711-201ENSMUST00000118889 535 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gm9136-201ENSMUST00000193368 454 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.72□□□□□ -0.53
Clip4Q8CI96 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clip4Q8CI96 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Clip4Q8CI96 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms