Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm13937-201ENSMUST00000121000 988 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm24398-201ENSMUST00000157870 109 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm37905-201ENSMUST00000195310 341 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm5996-201ENSMUST00000211110 718 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Paupar-201ENSMUST00000194826 3482 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Gm8492-201ENSMUST00000182375 987 ntBASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Gm38314-201ENSMUST00000195709 625 ntBASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf2Q8BZT2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh3rf2Q8BZT2 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Sh3rf2Q8BZT2 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.77□□□□□ -0.52
Sh3rf2Q8BZT2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms