Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rnf38Q8BI21 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.25□□□□□ -0.61
Rnf38Q8BI21 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf38Q8BI21 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf38Q8BI21 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf38Q8BI21 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf38Q8BI21 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rnf38Q8BI21 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Rnf38Q8BI21 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf38Q8BI21 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf38Q8BI21 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Gm24255-201ENSMUST00000104481 128 ntBASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Gm7783-201ENSMUST00000204795 781 ntBASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf38Q8BI21 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Gm11930-201ENSMUST00000117788 190 ntBASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Gm14381-201ENSMUST00000122105 414 ntBASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Gm3096-201ENSMUST00000185770 364 ntBASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.23□□□□□ -0.61
Rnf38Q8BI21 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.23□□□□□ -0.61
Rnf38Q8BI21 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf38Q8BI21 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf38Q8BI21 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms