Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Gm22133-201ENSMUST00000102082 109 ntBASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Gm7003-201ENSMUST00000195089 312 ntBASIC13.64□□□□□ -0.23
Samm50Q8BGH2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Gm12217-201ENSMUST00000118858 696 ntBASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.63□□□□□ -0.23
Samm50Q8BGH2 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.63□□□□□ -0.23
Samm50Q8BGH2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Samm50Q8BGH2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm15711-201ENSMUST00000118889 535 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm37666-201ENSMUST00000194110 866 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm17827-201ENSMUST00000211825 742 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm5455-201ENSMUST00000058710 715 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Erich3-203ENSMUST00000189969 3460 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Samm50Q8BGH2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Samm50Q8BGH2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms