Protein–RNA interactions for Protein: Q810N9

Ccdc172, Coiled-coil domain-containing protein 172, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc172Q810N9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm15595-201ENSMUST00000120840 961 ntBASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm12566-201ENSMUST00000121479 359 ntBASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm10807-201ENSMUST00000177134 795 ntBASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm29499-201ENSMUST00000189151 486 ntBASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm28329-201ENSMUST00000191208 689 ntBASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm29171-201ENSMUST00000191397 486 ntBASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm6108-201ENSMUST00000208365 367 ntBASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc172Q810N9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.22□□□□□ -0.29
Ccdc172Q810N9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc172Q810N9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Gm8731-201ENSMUST00000118088 412 ntBASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Gm15566-201ENSMUST00000121130 590 ntBASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Gm26461-201ENSMUST00000175064 290 ntBASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc172Q810N9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms