Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm24844-201ENSMUST00000158679 127 ntBASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm37835-201ENSMUST00000193305 361 ntBASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpp38Q80UU2 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Gm44506-201ENSMUST00000206278 965 ntBASIC11.6□□□□□ -0.55
Rpp38Q80UU2 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.6□□□□□ -0.55
Rpp38Q80UU2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Rpp38Q80UU2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rpp38Q80UU2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms