Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm12164-201ENSMUST00000121695 551 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm18056-201ENSMUST00000207670 568 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm18061-201ENSMUST00000208350 562 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm18063-201ENSMUST00000208529 568 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm18052-201ENSMUST00000208750 559 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm9996-201ENSMUST00000070359 913 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdp1Q7TSG2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm26083-201ENSMUST00000157904 193 ntBASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm25043-201ENSMUST00000158604 212 ntBASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ctdp1Q7TSG2 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Gm25214-201ENSMUST00000104573 129 ntBASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Gm11930-201ENSMUST00000117788 190 ntBASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Gm11439-201ENSMUST00000118598 409 ntBASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Gm15547-201ENSMUST00000122152 333 ntBASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms