Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcc2Q6PDG5 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Gm8100-201ENSMUST00000182906 988 ntBASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Gm4482-201ENSMUST00000200876 742 ntBASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Gm10288-201ENSMUST00000084614 537 ntBASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcc2Q6PDG5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Gm24891-201ENSMUST00000104391 136 ntBASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Gm11663-201ENSMUST00000117888 290 ntBASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Gm14724-201ENSMUST00000118400 537 ntBASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Gm23085-201ENSMUST00000157849 293 ntBASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Gm2965-201ENSMUST00000198365 343 ntBASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Spcs1-203ENSMUST00000226374 592 ntBASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc2Q6PDG5 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Gm9062-201ENSMUST00000117712 727 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms