Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd3Q6P9Z1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd3Q6P9Z1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd3Q6P9Z1 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd3Q6P9Z1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd3Q6P9Z1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd3Q6P9Z1 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd3Q6P9Z1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Smarcd3Q6P9Z1 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.65□□□□□ -0.71
Smarcd3Q6P9Z1 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Gm11930-201ENSMUST00000117788 190 ntBASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Gm14726-201ENSMUST00000120623 896 ntBASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd3Q6P9Z1 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm12241-201ENSMUST00000118330 726 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms