Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Gm12345-201ENSMUST00000119288 898 ntBASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Mir8091-201ENSMUST00000183602 139 ntBASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 AC154407.1-201ENSMUST00000226777 526 ntBASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 AC103672.1-201ENSMUST00000227502 365 ntBASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca2Q6DIC0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarca2Q6DIC0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarca2Q6DIC0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Smarca2Q6DIC0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Smarca2Q6DIC0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarca2Q6DIC0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarca2Q6DIC0 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Gm42928-201ENSMUST00000197338 3339 ntBASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Gm5808-201ENSMUST00000178090 357 ntBASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Gm43106-201ENSMUST00000199485 637 ntBASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarca2Q6DIC0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Gm6755-201ENSMUST00000100598 864 ntBASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Gm6740-201ENSMUST00000100617 864 ntBASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Gm16228-201ENSMUST00000162286 809 ntBASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Gm7928-201ENSMUST00000181249 701 ntBASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Gm44755-201ENSMUST00000207830 2102 ntBASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca2Q6DIC0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Gm9574-201ENSMUST00000173127 845 ntBASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 n-R5s130-201ENSMUST00000178128 119 ntBASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Gm24312-201ENSMUST00000178677 119 ntBASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 n-R5s106-201ENSMUST00000179060 119 ntBASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 n-R5s118-201ENSMUST00000179887 119 ntBASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Nsmce2-203ENSMUST00000227173 1122 ntBASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarca2Q6DIC0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms