Protein–RNA interactions for Protein: Q61476

Cd55b, Complement decay-accelerating factor transmembrane isoform, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd55bQ61476 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Gm8566-201ENSMUST00000120174 465 ntBASIC10.3□□□□□ -0.76
Cd55bQ61476 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Gm5733-201ENSMUST00000190232 939 ntBASIC10.3□□□□□ -0.76
Cd55bQ61476 Gm37246-201ENSMUST00000192665 835 ntBASIC10.3□□□□□ -0.76
Cd55bQ61476 Gm2965-201ENSMUST00000198365 343 ntBASIC10.3□□□□□ -0.76
Cd55bQ61476 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.3□□□□□ -0.76
Cd55bQ61476 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.3□□□□□ -0.76
Cd55bQ61476 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cd55bQ61476 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cd55bQ61476 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm24891-201ENSMUST00000104391 136 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm14724-201ENSMUST00000118400 537 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cd55bQ61476 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm23085-201ENSMUST00000157849 293 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm4482-201ENSMUST00000200876 742 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm45575-201ENSMUST00000210283 548 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm1821-202ENSMUST00000227415 750 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
Cd55bQ61476 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.29□□□□□ -0.76
Cd55bQ61476 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.29□□□□□ -0.76
Cd55bQ61476 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cd55bQ61476 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Cd55bQ61476 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Cd55bQ61476 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.29□□□□□ -0.76
Cd55bQ61476 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cd55bQ61476 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cd55bQ61476 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cd55bQ61476 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cd55bQ61476 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.28□□□□□ -0.76
Cd55bQ61476 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cd55bQ61476 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cd55bQ61476 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.28□□□□□ -0.76
Cd55bQ61476 Gm15207-201ENSMUST00000119259 442 ntBASIC10.28□□□□□ -0.76
Cd55bQ61476 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms