Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ift88Q61371 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.83□□□□□ -0.36
Ift88Q61371 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ift88Q61371 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ift88Q61371 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.82□□□□□ -0.36
Ift88Q61371 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ift88Q61371 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.82□□□□□ -0.36
Ift88Q61371 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.82□□□□□ -0.36
Ift88Q61371 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.82□□□□□ -0.36
Ift88Q61371 Gm12742-201ENSMUST00000117326 410 ntBASIC12.82□□□□□ -0.36
Ift88Q61371 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.82□□□□□ -0.36
Ift88Q61371 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.82□□□□□ -0.36
Ift88Q61371 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Ift88Q61371 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ift88Q61371 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ift88Q61371 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.82□□□□□ -0.36
Ift88Q61371 Rps4l-202ENSMUST00000204242 789 ntBASIC12.82□□□□□ -0.36
Ift88Q61371 Gm6334-201ENSMUST00000207083 228 ntBASIC12.82□□□□□ -0.36
Ift88Q61371 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.82□□□□□ -0.36
Ift88Q61371 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.82□□□□□ -0.36
Ift88Q61371 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ift88Q61371 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ift88Q61371 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ift88Q61371 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ift88Q61371 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Gm11500-201ENSMUST00000118237 601 ntBASIC12.81□□□□□ -0.36
Ift88Q61371 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.81□□□□□ -0.36
Ift88Q61371 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.81□□□□□ -0.36
Ift88Q61371 Mir8093-201ENSMUST00000185043 137 ntBASIC12.81□□□□□ -0.36
Ift88Q61371 Gm5982-201ENSMUST00000196234 512 ntBASIC12.81□□□□□ -0.36
Ift88Q61371 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ift88Q61371 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.81□□□□□ -0.36
Ift88Q61371 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.81□□□□□ -0.36
Ift88Q61371 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.81□□□□□ -0.36
Ift88Q61371 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Ift88Q61371 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ift88Q61371 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ift88Q61371 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ift88Q61371 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ift88Q61371 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ift88Q61371 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ift88Q61371 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ift88Q61371 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ift88Q61371 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.8□□□□□ -0.36
Ift88Q61371 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ift88Q61371 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.8□□□□□ -0.36
Ift88Q61371 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ift88Q61371 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ift88Q61371 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ift88Q61371 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ift88Q61371 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ift88Q61371 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.8□□□□□ -0.36
Ift88Q61371 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ift88Q61371 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.8□□□□□ -0.36
Ift88Q61371 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.8□□□□□ -0.36
Ift88Q61371 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms