Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Gm4943-201ENSMUST00000132879 424 ntBASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Gm26957-201ENSMUST00000182645 977 ntBASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC15.02■□□□□ -0
Sf3b2Q3UJB0 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b2Q3UJB0 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Rps3a2-201ENSMUST00000074245 792 ntBASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Rps3a3-201ENSMUST00000074680 795 ntBASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Gm10580-201ENSMUST00000097985 396 ntBASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Gm10582-201ENSMUST00000097987 396 ntBASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Gm10583-201ENSMUST00000097988 396 ntBASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b2Q3UJB0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Sf3b2Q3UJB0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Gm1826-201ENSMUST00000118646 1162 ntBASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Gm6114-201ENSMUST00000182472 968 ntBASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Gm37207-201ENSMUST00000194284 296 ntBASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b2Q3UJB0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Gm26119-201ENSMUST00000175601 104 ntBASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Gm9102-201ENSMUST00000219250 465 ntBASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 AC121567.1-201ENSMUST00000227213 842 ntBASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b2Q3UJB0 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.99□□□□□ -0.01
Sf3b2Q3UJB0 Prss23os-202ENSMUST00000179361 1362 ntBASIC14.99□□□□□ -0.01
Sf3b2Q3UJB0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b2Q3UJB0 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b2Q3UJB0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sf3b2Q3UJB0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms