Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43aQ3TL54 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Gm14644-201ENSMUST00000116671 647 ntBASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Gm7584-201ENSMUST00000175829 940 ntBASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43aQ3TL54 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Gm6334-201ENSMUST00000207083 228 ntBASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim43aQ3TL54 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms