Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Gm26013-201ENSMUST00000104404 119 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Gm10731-201ENSMUST00000181171 448 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Gm5706-201ENSMUST00000181525 993 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Gm5298-201ENSMUST00000201122 892 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Gm43852-201ENSMUST00000202098 917 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm14942-201ENSMUST00000119642 336 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm23218-201ENSMUST00000158124 276 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm24844-201ENSMUST00000158679 127 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm4034-201ENSMUST00000187674 480 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm37458-201ENSMUST00000194055 410 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm42657-201ENSMUST00000201746 211 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.82□□□□□ -0.52
Ebf1Q07802 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.82□□□□□ -0.52
Ebf1Q07802 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ebf1Q07802 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.81□□□□□ -0.52
Ebf1Q07802 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.81□□□□□ -0.52
Ebf1Q07802 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms