Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm27025-201ENSMUST00000182392 942 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm2788-205ENSMUST00000209849 933 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 CT025639.2-201ENSMUST00000224440 1220 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 AC154594.1-201ENSMUST00000225171 1273 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 AC163664.1-201ENSMUST00000226251 1248 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 CT025523.1-201ENSMUST00000228318 694 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm8181-201ENSMUST00000062242 669 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm23272-201ENSMUST00000104053 129 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm9673-201ENSMUST00000119287 781 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm11736-201ENSMUST00000121468 505 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm24328-201ENSMUST00000175104 67 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm16958-202ENSMUST00000181792 830 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm29588-201ENSMUST00000185738 298 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Sh2d1a-207ENSMUST00000189753 1223 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm37207-201ENSMUST00000194284 296 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm43380-201ENSMUST00000200421 220 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm43946-201ENSMUST00000204058 886 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 AL929555.1-201ENSMUST00000215283 509 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC11.81□□□□□ -0.52
Col9a1Q05722 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.81□□□□□ -0.52
Col9a1Q05722 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm5451-201ENSMUST00000080545 579 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Col9a1Q05722 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.81□□□□□ -0.52
Col9a1Q05722 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms