Protein–RNA interactions for Protein: Q04207

Rela, Transcription factor p65, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RelaQ04207 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.1□□□□□ -0.47
RelaQ04207 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.1□□□□□ -0.47
RelaQ04207 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.1□□□□□ -0.47
RelaQ04207 Gm14017-201ENSMUST00000121934 386 ntBASIC12.1□□□□□ -0.47
RelaQ04207 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.1□□□□□ -0.47
RelaQ04207 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.1□□□□□ -0.47
RelaQ04207 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.1□□□□□ -0.47
RelaQ04207 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Gm26361-201ENSMUST00000158868 186 ntBASIC12.1□□□□□ -0.47
RelaQ04207 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.1□□□□□ -0.47
RelaQ04207 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RelaQ04207 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.1□□□□□ -0.47
RelaQ04207 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.1□□□□□ -0.47
RelaQ04207 Rprl1-202ENSMUST00000198476 238 ntBASIC12.1□□□□□ -0.47
RelaQ04207 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Gm44651-201ENSMUST00000207343 372 ntBASIC12.1□□□□□ -0.47
RelaQ04207 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.1□□□□□ -0.47
RelaQ04207 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.1□□□□□ -0.47
RelaQ04207 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.1□□□□□ -0.47
RelaQ04207 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RelaQ04207 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RelaQ04207 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.1□□□□□ -0.47
RelaQ04207 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RelaQ04207 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
RelaQ04207 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
RelaQ04207 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.1□□□□□ -0.47
RelaQ04207 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RelaQ04207 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RelaQ04207 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
RelaQ04207 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RelaQ04207 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.09□□□□□ -0.47
RelaQ04207 Gm14644-201ENSMUST00000116671 647 ntBASIC12.09□□□□□ -0.47
RelaQ04207 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Gm6963-201ENSMUST00000147879 379 ntBASIC12.09□□□□□ -0.47
RelaQ04207 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.09□□□□□ -0.47
RelaQ04207 Gm45186-201ENSMUST00000206874 478 ntBASIC12.09□□□□□ -0.47
RelaQ04207 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
RelaQ04207 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.09□□□□□ -0.47
RelaQ04207 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
RelaQ04207 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.09□□□□□ -0.47
RelaQ04207 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.09□□□□□ -0.47
RelaQ04207 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.09□□□□□ -0.47
RelaQ04207 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.09□□□□□ -0.47
RelaQ04207 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.09□□□□□ -0.47
RelaQ04207 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.09□□□□□ -0.47
RelaQ04207 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RelaQ04207 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.09□□□□□ -0.47
RelaQ04207 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.09□□□□□ -0.47
RelaQ04207 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RelaQ04207 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RelaQ04207 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RelaQ04207 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
RelaQ04207 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
RelaQ04207 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.08□□□□□ -0.47
RelaQ04207 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RelaQ04207 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RelaQ04207 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RelaQ04207 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.08□□□□□ -0.48
RelaQ04207 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
RelaQ04207 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
RelaQ04207 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RelaQ04207 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RelaQ04207 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms