Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Gm22594-201ENSMUST00000104251 130 ntBASIC14.55□□□□□ -0.08
Smarcc1P97496 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Gm42430-201ENSMUST00000197209 616 ntBASIC14.55□□□□□ -0.08
Smarcc1P97496 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.55□□□□□ -0.08
Smarcc1P97496 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Gm6855-201ENSMUST00000206307 790 ntBASIC14.55□□□□□ -0.08
Smarcc1P97496 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc1P97496 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smarcc1P97496 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcc1P97496 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.54□□□□□ -0.08
Smarcc1P97496 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Gm11996-201ENSMUST00000117538 915 ntBASIC14.54□□□□□ -0.08
Smarcc1P97496 Gm15197-201ENSMUST00000120526 478 ntBASIC14.54□□□□□ -0.08
Smarcc1P97496 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.54□□□□□ -0.08
Smarcc1P97496 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Gm37365-201ENSMUST00000193109 409 ntBASIC14.54□□□□□ -0.08
Smarcc1P97496 Trav11n-201ENSMUST00000200113 343 ntBASIC14.54□□□□□ -0.08
Smarcc1P97496 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcc1P97496 AC154305.2-201ENSMUST00000225813 901 ntBASIC14.54□□□□□ -0.08
Smarcc1P97496 Gm26670-202ENSMUST00000226862 340 ntBASIC14.54□□□□□ -0.08
Smarcc1P97496 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc1P97496 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcc1P97496 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Smarcc1P97496 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc1P97496 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms