Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Npas1P97459 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Npas1P97459 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Npas1P97459 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.76□□□□□ -0.85
Npas1P97459 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Gm6222-202ENSMUST00000182143 629 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Gm27847-201ENSMUST00000183711 107 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Gm27375-201ENSMUST00000183799 107 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Gm27486-201ENSMUST00000184923 80 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Gm42937-201ENSMUST00000197360 752 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Npas1P97459 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.76□□□□□ -0.85
Npas1P97459 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Gm17794-201ENSMUST00000220252 955 ntBASIC9.76□□□□□ -0.85
Npas1P97459 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Gm10268-201ENSMUST00000085340 555 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.76□□□□□ -0.85
Npas1P97459 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.76□□□□□ -0.85
Npas1P97459 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Npas1P97459 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Npas1P97459 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.76□□□□□ -0.85
Npas1P97459 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Npas1P97459 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.75□□□□□ -0.85
Npas1P97459 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.75□□□□□ -0.85
Npas1P97459 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Npas1P97459 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Npas1P97459 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Npas1P97459 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Gm8738-201ENSMUST00000172606 329 ntBASIC9.75□□□□□ -0.85
Npas1P97459 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.75□□□□□ -0.85
Npas1P97459 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Npas1P97459 Gm26927-201ENSMUST00000182385 965 ntBASIC9.75□□□□□ -0.85
Npas1P97459 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.75□□□□□ -0.85
Npas1P97459 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.75□□□□□ -0.85
Npas1P97459 Gm45925-201ENSMUST00000218882 744 ntBASIC9.75□□□□□ -0.85
Npas1P97459 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Gm10076-201ENSMUST00000073238 384 ntBASIC9.75□□□□□ -0.85
Npas1P97459 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.75□□□□□ -0.85
Npas1P97459 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.75□□□□□ -0.85
Npas1P97459 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Npas1P97459 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Npas1P97459 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Npas1P97459 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Npas1P97459 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Npas1P97459 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms