Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43cP86449 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim43cP86449 Gm13916-201ENSMUST00000117368 628 ntBASIC12.64□□□□□ -0.39
Trim43cP86449 Gm7150-201ENSMUST00000122032 981 ntBASIC12.64□□□□□ -0.39
Trim43cP86449 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim43cP86449 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim43cP86449 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim43cP86449 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43cP86449 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim43cP86449 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.64□□□□□ -0.39
Trim43cP86449 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43cP86449 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Trim43cP86449 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim43cP86449 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim43cP86449 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43cP86449 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim43cP86449 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Trim43cP86449 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim43cP86449 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trim43cP86449 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim43cP86449 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43cP86449 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.63□□□□□ -0.39
Trim43cP86449 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim43cP86449 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim43cP86449 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43cP86449 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Gm24844-201ENSMUST00000158679 127 ntBASIC12.63□□□□□ -0.39
Trim43cP86449 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.63□□□□□ -0.39
Trim43cP86449 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Trim43cP86449 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Gm18367-201ENSMUST00000176139 600 ntBASIC12.63□□□□□ -0.39
Trim43cP86449 Mir6927-201ENSMUST00000184494 71 ntBASIC12.63□□□□□ -0.39
Trim43cP86449 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim43cP86449 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43cP86449 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim43cP86449 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.63□□□□□ -0.39
Trim43cP86449 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Gm4978-201ENSMUST00000071565 801 ntBASIC12.63□□□□□ -0.39
Trim43cP86449 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.63□□□□□ -0.39
Trim43cP86449 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43cP86449 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43cP86449 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim43cP86449 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim43cP86449 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trim43cP86449 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43cP86449 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim43cP86449 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 Gm24891-201ENSMUST00000104391 136 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Trim43cP86449 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Gm13809-201ENSMUST00000117921 597 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 Gm13045-201ENSMUST00000119019 712 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 Gm3329-201ENSMUST00000159873 556 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 Mir5120-201ENSMUST00000175020 78 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim43cP86449 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 Gm5363-201ENSMUST00000211927 938 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim43cP86449 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.62□□□□□ -0.39
Trim43cP86449 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim43cP86449 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms