Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.6□□□□□ -0.39
CiitaP79621 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.6□□□□□ -0.39
CiitaP79621 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CiitaP79621 Gm44315-201ENSMUST00000203041 219 ntBASIC12.6□□□□□ -0.39
CiitaP79621 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.6□□□□□ -0.39
CiitaP79621 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.6□□□□□ -0.39
CiitaP79621 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.6□□□□□ -0.39
CiitaP79621 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CiitaP79621 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CiitaP79621 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CiitaP79621 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CiitaP79621 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.59□□□□□ -0.39
CiitaP79621 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
CiitaP79621 Gm7741-201ENSMUST00000181445 989 ntBASIC12.59□□□□□ -0.39
CiitaP79621 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.59□□□□□ -0.39
CiitaP79621 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.59□□□□□ -0.39
CiitaP79621 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Gm10752-201ENSMUST00000218348 729 ntBASIC12.59□□□□□ -0.39
CiitaP79621 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.59□□□□□ -0.39
CiitaP79621 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CiitaP79621 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CiitaP79621 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CiitaP79621 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.58□□□□□ -0.39
CiitaP79621 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CiitaP79621 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CiitaP79621 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CiitaP79621 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CiitaP79621 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.58□□□□□ -0.4
CiitaP79621 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CiitaP79621 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CiitaP79621 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CiitaP79621 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.58□□□□□ -0.4
CiitaP79621 Gm11451-201ENSMUST00000118946 630 ntBASIC12.58□□□□□ -0.4
CiitaP79621 Gm12899-201ENSMUST00000120565 551 ntBASIC12.58□□□□□ -0.4
CiitaP79621 Gm15549-201ENSMUST00000121595 622 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms