Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.18□□□□□ -0.62
Prox1P48437 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.18□□□□□ -0.62
Prox1P48437 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.18□□□□□ -0.62
Prox1P48437 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.18□□□□□ -0.62
Prox1P48437 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.18□□□□□ -0.62
Prox1P48437 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Prox1P48437 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prox1P48437 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.18□□□□□ -0.62
Prox1P48437 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.17□□□□□ -0.62
Prox1P48437 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.17□□□□□ -0.62
Prox1P48437 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Gm13875-201ENSMUST00000120162 282 ntBASIC11.17□□□□□ -0.62
Prox1P48437 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.17□□□□□ -0.62
Prox1P48437 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Rprl1-201ENSMUST00000158050 327 ntBASIC11.17□□□□□ -0.62
Prox1P48437 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Prox1P48437 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.17□□□□□ -0.62
Prox1P48437 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.17□□□□□ -0.62
Prox1P48437 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.17□□□□□ -0.62
Prox1P48437 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.17□□□□□ -0.62
Prox1P48437 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Prox1P48437 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.17□□□□□ -0.62
Prox1P48437 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Prox1P48437 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.17□□□□□ -0.62
Prox1P48437 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Prox1P48437 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prox1P48437 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Prox1P48437 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.16□□□□□ -0.62
Prox1P48437 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Prox1P48437 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.16□□□□□ -0.62
Prox1P48437 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Gm23931-201ENSMUST00000103842 109 ntBASIC11.16□□□□□ -0.62
Prox1P48437 Gm15610-201ENSMUST00000120584 195 ntBASIC11.16□□□□□ -0.62
Prox1P48437 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.16□□□□□ -0.62
Prox1P48437 Gm13316-201ENSMUST00000140537 691 ntBASIC11.16□□□□□ -0.62
Prox1P48437 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.16□□□□□ -0.62
Prox1P48437 Gm5706-201ENSMUST00000181525 993 ntBASIC11.16□□□□□ -0.62
Prox1P48437 Gm2546-201ENSMUST00000182630 991 ntBASIC11.16□□□□□ -0.62
Prox1P48437 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.16□□□□□ -0.62
Prox1P48437 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.16□□□□□ -0.62
Prox1P48437 Gm43002-201ENSMUST00000200310 155 ntBASIC11.16□□□□□ -0.62
Prox1P48437 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.16□□□□□ -0.62
Prox1P48437 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Gm807-202ENSMUST00000224929 408 ntBASIC11.16□□□□□ -0.62
Prox1P48437 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.16□□□□□ -0.62
Prox1P48437 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.16□□□□□ -0.62
Prox1P48437 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.16□□□□□ -0.62
Prox1P48437 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prox1P48437 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Prox1P48437 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prox1P48437 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms