Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.51□□□□□ -0.73
Rfx3P48381 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Rfx3P48381 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Rfx3P48381 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Rfx3P48381 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rfx3P48381 Gm13350-201ENSMUST00000120519 479 ntBASIC10.51□□□□□ -0.73
Rfx3P48381 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.51□□□□□ -0.73
Rfx3P48381 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.51□□□□□ -0.73
Rfx3P48381 Gm8885-201ENSMUST00000189382 598 ntBASIC10.51□□□□□ -0.73
Rfx3P48381 Gm32999-201ENSMUST00000192693 562 ntBASIC10.51□□□□□ -0.73
Rfx3P48381 Rprl1-202ENSMUST00000198476 238 ntBASIC10.51□□□□□ -0.73
Rfx3P48381 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.51□□□□□ -0.73
Rfx3P48381 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.51□□□□□ -0.73
Rfx3P48381 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.51□□□□□ -0.73
Rfx3P48381 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rfx3P48381 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Rfx3P48381 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Rfx3P48381 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.51□□□□□ -0.73
Rfx3P48381 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.51□□□□□ -0.73
Rfx3P48381 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.51□□□□□ -0.73
Rfx3P48381 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rfx3P48381 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Rfx3P48381 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
Rfx3P48381 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rfx3P48381 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Gm24255-201ENSMUST00000104481 128 ntBASIC10.5□□□□□ -0.73
Rfx3P48381 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 Gm11511-201ENSMUST00000118146 540 ntBASIC10.5□□□□□ -0.73
Rfx3P48381 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Gm20482-202ENSMUST00000174729 825 ntBASIC10.5□□□□□ -0.73
Rfx3P48381 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Rfx3P48381 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.5□□□□□ -0.73
Rfx3P48381 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.5□□□□□ -0.73
Rfx3P48381 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rfx3P48381 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rfx3P48381 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rfx3P48381 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rfx3P48381 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rfx3P48381 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.49□□□□□ -0.73
Rfx3P48381 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.49□□□□□ -0.73
Rfx3P48381 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Rfx3P48381 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms