Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-6P43688 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-6P43688 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-6P43688 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Nkx2-6P43688 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-6P43688 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-6P43688 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-6P43688 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-6P43688 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-6P43688 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.02□□□□□ -0.64
Nkx2-6P43688 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.02□□□□□ -0.65
Nkx2-6P43688 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.02□□□□□ -0.65
Nkx2-6P43688 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Gm8459-201ENSMUST00000162504 760 ntBASIC11.02□□□□□ -0.65
Nkx2-6P43688 Gm10731-201ENSMUST00000181171 448 ntBASIC11.02□□□□□ -0.65
Nkx2-6P43688 Mir6998-201ENSMUST00000183343 64 ntBASIC11.02□□□□□ -0.65
Nkx2-6P43688 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Gm2875-201ENSMUST00000211333 360 ntBASIC11.02□□□□□ -0.65
Nkx2-6P43688 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.02□□□□□ -0.65
Nkx2-6P43688 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Nkx2-6P43688 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.02□□□□□ -0.65
Nkx2-6P43688 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.02□□□□□ -0.65
Nkx2-6P43688 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-6P43688 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nkx2-6P43688 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.01□□□□□ -0.65
Nkx2-6P43688 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm23272-201ENSMUST00000104053 129 ntBASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm25076-201ENSMUST00000104098 132 ntBASIC11.01□□□□□ -0.65
Nkx2-6P43688 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm12419-201ENSMUST00000116649 636 ntBASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Mir8093-201ENSMUST00000185043 137 ntBASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm29155-201ENSMUST00000185910 269 ntBASIC11.01□□□□□ -0.65
Nkx2-6P43688 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.01□□□□□ -0.65
Nkx2-6P43688 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.01□□□□□ -0.65
Nkx2-6P43688 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx2-6P43688 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms