Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.54□□□□□ -0.88
VhlP40338 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.54□□□□□ -0.88
VhlP40338 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.54□□□□□ -0.88
VhlP40338 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.54□□□□□ -0.88
VhlP40338 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
VhlP40338 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.54□□□□□ -0.88
VhlP40338 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.54□□□□□ -0.88
VhlP40338 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
VhlP40338 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
VhlP40338 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.54□□□□□ -0.88
VhlP40338 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
VhlP40338 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.54□□□□□ -0.88
VhlP40338 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.54□□□□□ -0.88
VhlP40338 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.54□□□□□ -0.88
VhlP40338 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.54□□□□□ -0.88
VhlP40338 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
VhlP40338 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
VhlP40338 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
VhlP40338 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.53□□□□□ -0.88
VhlP40338 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.53□□□□□ -0.88
VhlP40338 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.53□□□□□ -0.88
VhlP40338 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
VhlP40338 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.53□□□□□ -0.88
VhlP40338 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.53□□□□□ -0.88
VhlP40338 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Btrc-209ENSMUST00000224478 2194 ntBASIC9.53□□□□□ -0.88
VhlP40338 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Gm11989-201ENSMUST00000117240 672 ntBASIC9.53□□□□□ -0.88
VhlP40338 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Gm11511-201ENSMUST00000118146 540 ntBASIC9.53□□□□□ -0.88
VhlP40338 Gm11362-201ENSMUST00000118838 850 ntBASIC9.53□□□□□ -0.88
VhlP40338 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.53□□□□□ -0.88
VhlP40338 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
VhlP40338 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.53□□□□□ -0.88
VhlP40338 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.53□□□□□ -0.88
VhlP40338 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
VhlP40338 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.53□□□□□ -0.88
VhlP40338 Gm8956-201ENSMUST00000203939 825 ntBASIC9.53□□□□□ -0.88
VhlP40338 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.53□□□□□ -0.88
VhlP40338 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.53□□□□□ -0.88
VhlP40338 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.53□□□□□ -0.88
VhlP40338 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.53□□□□□ -0.88
VhlP40338 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.53□□□□□ -0.88
VhlP40338 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
VhlP40338 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.53□□□□□ -0.88
VhlP40338 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VhlP40338 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms