Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm37852-201ENSMUST00000193027 350 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm5982-201ENSMUST00000196234 512 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm5996-201ENSMUST00000211110 718 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 BC106175-202ENSMUST00000219344 1213 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.74□□□□□ -0.69
Sftpa1P35242 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Gm11500-201ENSMUST00000118237 601 ntBASIC10.74□□□□□ -0.69
Sftpa1P35242 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Gm9507-202ENSMUST00000180157 654 ntBASIC10.74□□□□□ -0.69
Sftpa1P35242 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Trav11n-201ENSMUST00000200113 343 ntBASIC10.74□□□□□ -0.69
Sftpa1P35242 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.74□□□□□ -0.69
Sftpa1P35242 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.74□□□□□ -0.69
Sftpa1P35242 Arhgef33-207ENSMUST00000224966 490 ntBASIC10.74□□□□□ -0.69
Sftpa1P35242 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Gm4978-201ENSMUST00000071565 801 ntBASIC10.74□□□□□ -0.69
Sftpa1P35242 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.74□□□□□ -0.69
Sftpa1P35242 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Sftpa1P35242 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sftpa1P35242 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm22594-201ENSMUST00000104251 130 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm12663-201ENSMUST00000118481 958 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm14993-201ENSMUST00000121180 164 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm15549-201ENSMUST00000121595 622 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm26047-201ENSMUST00000157308 113 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm25492-201ENSMUST00000157383 129 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sftpa1P35242 Gm25998-201ENSMUST00000175397 53 ntBASIC10.73□□□□□ -0.69
Sftpa1P35242 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.73□□□□□ -0.69
Sftpa1P35242 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sftpa1P35242 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms