Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.32□□□□□ -0.28
Vcam1P29533 Gm5298-201ENSMUST00000201122 892 ntBASIC13.32□□□□□ -0.28
Vcam1P29533 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vcam1P29533 Gm7082-201ENSMUST00000209880 969 ntBASIC13.32□□□□□ -0.28
Vcam1P29533 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.32□□□□□ -0.28
Vcam1P29533 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Vcam1P29533 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vcam1P29533 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vcam1P29533 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vcam1P29533 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.32□□□□□ -0.28
Vcam1P29533 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vcam1P29533 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.32□□□□□ -0.28
Vcam1P29533 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vcam1P29533 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.31□□□□□ -0.28
Vcam1P29533 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vcam1P29533 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Vcam1P29533 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vcam1P29533 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.31□□□□□ -0.28
Vcam1P29533 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.31□□□□□ -0.28
Vcam1P29533 Gm3329-201ENSMUST00000159873 556 ntBASIC13.31□□□□□ -0.28
Vcam1P29533 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vcam1P29533 Olfml3-204ENSMUST00000169286 874 ntBASIC13.31□□□□□ -0.28
Vcam1P29533 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.31□□□□□ -0.28
Vcam1P29533 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vcam1P29533 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.31□□□□□ -0.28
Vcam1P29533 Gm7593-201ENSMUST00000187246 644 ntBASIC13.31□□□□□ -0.28
Vcam1P29533 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vcam1P29533 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vcam1P29533 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vcam1P29533 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vcam1P29533 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.31□□□□□ -0.28
Vcam1P29533 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.31□□□□□ -0.28
Vcam1P29533 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vcam1P29533 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vcam1P29533 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.31□□□□□ -0.28
Vcam1P29533 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vcam1P29533 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vcam1P29533 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.3□□□□□ -0.28
Vcam1P29533 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Vcam1P29533 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vcam1P29533 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm8302-201ENSMUST00000119217 852 ntBASIC13.3□□□□□ -0.28
Vcam1P29533 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm22379-201ENSMUST00000157480 131 ntBASIC13.3□□□□□ -0.28
Vcam1P29533 Gm17192-201ENSMUST00000169031 511 ntBASIC13.3□□□□□ -0.28
Vcam1P29533 Gm9081-201ENSMUST00000182346 991 ntBASIC13.3□□□□□ -0.28
Vcam1P29533 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm19587-201ENSMUST00000191395 545 ntBASIC13.3□□□□□ -0.28
Vcam1P29533 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.3□□□□□ -0.28
Vcam1P29533 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vcam1P29533 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.3□□□□□ -0.28
Vcam1P29533 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.3□□□□□ -0.28
Vcam1P29533 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.3□□□□□ -0.28
Vcam1P29533 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms