Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pde6bP23440 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pde6bP23440 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Pde6bP23440 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Pde6bP23440 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Pde6bP23440 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pde6bP23440 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.76□□□□□ -0.37
Pde6bP23440 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.76□□□□□ -0.37
Pde6bP23440 Gm25072-201ENSMUST00000175233 235 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.76□□□□□ -0.37
Pde6bP23440 Gm21092-201ENSMUST00000178995 955 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pde6bP23440 Gm29155-201ENSMUST00000185910 269 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Gm43852-201ENSMUST00000202098 917 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 Gm44506-201ENSMUST00000206278 965 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pde6bP23440 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.76□□□□□ -0.37
Pde6bP23440 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pde6bP23440 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Pde6bP23440 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pde6bP23440 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.76□□□□□ -0.37
Pde6bP23440 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pde6bP23440 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6bP23440 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.75□□□□□ -0.37
Pde6bP23440 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pde6bP23440 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Pde6bP23440 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Gm16071-201ENSMUST00000119589 793 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Gm13182-201ENSMUST00000122241 312 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.75□□□□□ -0.37
Pde6bP23440 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Gm23153-201ENSMUST00000175323 313 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.75□□□□□ -0.37
Pde6bP23440 Gm17826-201ENSMUST00000189720 798 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Gm42518-201ENSMUST00000196277 938 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Gm6108-201ENSMUST00000208365 367 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.75□□□□□ -0.37
Pde6bP23440 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.75□□□□□ -0.37
Pde6bP23440 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pde6bP23440 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms