Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopeO89079 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CopeO89079 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CopeO89079 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.96□□□□□ -0.5
CopeO89079 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopeO89079 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopeO89079 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopeO89079 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.96□□□□□ -0.5
CopeO89079 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopeO89079 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopeO89079 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
CopeO89079 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CopeO89079 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CopeO89079 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CopeO89079 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.95□□□□□ -0.5
CopeO89079 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.95□□□□□ -0.5
CopeO89079 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.95□□□□□ -0.5
CopeO89079 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.95□□□□□ -0.5
CopeO89079 Gm11425-201ENSMUST00000119608 498 ntBASIC11.95□□□□□ -0.5
CopeO89079 Gm11660-201ENSMUST00000120955 412 ntBASIC11.95□□□□□ -0.5
CopeO89079 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CopeO89079 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
CopeO89079 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Mir1982-201ENSMUST00000157368 74 ntBASIC11.95□□□□□ -0.5
CopeO89079 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.95□□□□□ -0.5
CopeO89079 Gm3096-201ENSMUST00000185770 364 ntBASIC11.95□□□□□ -0.5
CopeO89079 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.95□□□□□ -0.5
CopeO89079 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.95□□□□□ -0.5
CopeO89079 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.95□□□□□ -0.5
CopeO89079 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.95□□□□□ -0.5
CopeO89079 Gm43966-201ENSMUST00000203301 612 ntBASIC11.95□□□□□ -0.5
CopeO89079 Gm45880-201ENSMUST00000213041 853 ntBASIC11.95□□□□□ -0.5
CopeO89079 Gm10608-202ENSMUST00000213924 676 ntBASIC11.95□□□□□ -0.5
CopeO89079 Gm2553-201ENSMUST00000215986 605 ntBASIC11.95□□□□□ -0.5
CopeO89079 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CopeO89079 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.95□□□□□ -0.5
CopeO89079 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Gm9396-201ENSMUST00000076703 567 ntBASIC11.95□□□□□ -0.5
CopeO89079 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.95□□□□□ -0.5
CopeO89079 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CopeO89079 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CopeO89079 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CopeO89079 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopeO89079 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.95□□□□□ -0.5
CopeO89079 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.95□□□□□ -0.5
CopeO89079 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CopeO89079 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.94□□□□□ -0.5
CopeO89079 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.94□□□□□ -0.5
CopeO89079 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.94□□□□□ -0.5
CopeO89079 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CopeO89079 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
CopeO89079 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CopeO89079 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CopeO89079 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.94□□□□□ -0.5
CopeO89079 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Gm5070-201ENSMUST00000177599 862 ntBASIC11.94□□□□□ -0.5
CopeO89079 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Gm29396-201ENSMUST00000185659 716 ntBASIC11.94□□□□□ -0.5
CopeO89079 Gm30285-201ENSMUST00000214614 422 ntBASIC11.94□□□□□ -0.5
CopeO89079 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Gm5455-201ENSMUST00000058710 715 ntBASIC11.94□□□□□ -0.5
CopeO89079 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.94□□□□□ -0.5
CopeO89079 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms