Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Gm13392-201ENSMUST00000117708 150 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.78□□□□□ -0.2
Smarce1O54941 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm38117-201ENSMUST00000194653 939 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Gm5982-201ENSMUST00000196234 512 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm7399-201ENSMUST00000032395 858 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 AC125374.1-201ENSMUST00000213573 1400 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.78□□□□□ -0.2
Smarce1O54941 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.78□□□□□ -0.2
Smarce1O54941 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarce1O54941 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarce1O54941 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarce1O54941 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Smarce1O54941 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Smarce1O54941 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarce1O54941 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Smarce1O54941 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarce1O54941 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarce1O54941 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.77□□□□□ -0.21
Smarce1O54941 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Gm3329-201ENSMUST00000159873 556 ntBASIC13.77□□□□□ -0.21
Smarce1O54941 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Smarce1O54941 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarce1O54941 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Gm8343-201ENSMUST00000182705 994 ntBASIC13.77□□□□□ -0.21
Smarce1O54941 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarce1O54941 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.77□□□□□ -0.21
Smarce1O54941 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Gm6334-201ENSMUST00000207083 228 ntBASIC13.77□□□□□ -0.21
Smarce1O54941 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarce1O54941 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarce1O54941 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarce1O54941 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.77□□□□□ -0.21
Smarce1O54941 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Smarce1O54941 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Smarce1O54941 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Smarce1O54941 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Smarce1O54941 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarce1O54941 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.76□□□□□ -0.21
Smarce1O54941 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Smarce1O54941 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smarce1O54941 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarce1O54941 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms