Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.66□□□□□ -0.22
Slc1a4O35874 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Slc1a4O35874 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Slc1a4O35874 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm22711-201ENSMUST00000116890 133 ntBASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm12176-201ENSMUST00000121420 875 ntBASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm7150-201ENSMUST00000122032 981 ntBASIC13.66□□□□□ -0.22
Slc1a4O35874 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc1a4O35874 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm45770-201ENSMUST00000212105 616 ntBASIC13.66□□□□□ -0.22
Slc1a4O35874 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.66□□□□□ -0.22
Slc1a4O35874 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Slc1a4O35874 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc1a4O35874 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.65□□□□□ -0.22
Slc1a4O35874 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.65□□□□□ -0.22
Slc1a4O35874 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.65□□□□□ -0.22
Slc1a4O35874 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.65□□□□□ -0.22
Slc1a4O35874 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.65□□□□□ -0.22
Slc1a4O35874 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.65□□□□□ -0.22
Slc1a4O35874 Gm9132-201ENSMUST00000210182 832 ntBASIC13.65□□□□□ -0.22
Slc1a4O35874 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.65□□□□□ -0.22
Slc1a4O35874 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Slc1a4O35874 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.65□□□□□ -0.22
Slc1a4O35874 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.65□□□□□ -0.22
Slc1a4O35874 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.65□□□□□ -0.22
Slc1a4O35874 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Slc1a4O35874 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc1a4O35874 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.64□□□□□ -0.23
Slc1a4O35874 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc1a4O35874 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc1a4O35874 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.64□□□□□ -0.23
Slc1a4O35874 Gm8737-201ENSMUST00000122208 642 ntBASIC13.64□□□□□ -0.23
Slc1a4O35874 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.64□□□□□ -0.23
Slc1a4O35874 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms